David Needleman

TitleAdjunct Faculty
InstitutionThomas Jefferson University
DepartmentGrad School Biomedical Science
Address1020 Locust St.
Philadelphia PA 19107
Phone215-503-0150
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Richards GP, Watson MA, Madison D, Soffer N, Needleman DS, Soroka DS, Uknalis J, Baranzoni GM, Church KM, Polson SW, Elston R, Langdon C, Sulakvelidze A. Bacteriophages against Vibrio coralliilyticus and Vibrio tubiashii: Isolation, Characterization, and Remediation of Larval Oyster Mortalities. Appl Environ Microbiol. 2021 Apr 27; 87(10). PMID: 33674441.
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    2. Elder JR, Fratamico PM, Liu Y, Needleman DS, Bagi L, Tebbs R, Allred A, Siddavatam P, Suren H, Gujjula KR, DebRoy C, Dudley EG, Yan X. A Targeted Sequencing Assay for Serotyping Escherichia coli Using AgriSeq Technology. Front Microbiol. 2020; 11:627997. PMID: 33519788.
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    3. Renye JA, Needleman DS, Steinberg DH. Complete Genome Sequences of Bacteriocin-Producing Streptococcus thermophilus Strains ST106 and ST109. Microbiol Resour Announc. 2019 Feb; 8(7). PMID: 30801058.
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    4. Richards GP, Needleman DS, Watson MA, Polson SW. Whole-Genome Sequences of Two Pseudoalteromonas piscicida Strains, DE1-A and DE2-A, with Strong Antibacterial Activity against Vibrio vulnificus. Microbiol Resour Announc. 2019 Jan; 8(1). PMID: 30637397.
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    5. Richards GP, Kingham BF, Shevchenko O, Watson MA, Needleman DS. Complete Genome Sequence of Vibrio coralliilyticus RE22, a Marine Bacterium Pathogenic toward Larval Shellfish. Microbiol Resour Announc. 2018 Nov; 7(17). PMID: 30533767.
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    6. Xu A, Johnson JR, Sheen S, Needleman DS, Sommers C. Draft Genomic Sequencing of Six Potential Extraintestinal Pathogenic Escherichia coli Isolates from Retail Chicken Meat. Genome Announc. 2018 May 24; 6(21). PMID: 29798928.
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    7. Xu A, Hertrich S, Needleman DS, Sheen S, Sommers C. Draft Genome Sequences of Four Uropathogenic Escherichia coli Serotype O4:H5 Isolates (ATCC 700414, 700415, 700416, and 700417). Genome Announc. 2018 Mar 15; 6(11). PMID: 29545296.
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    8. Renye JA, Needleman DS, Somkuti GA, Steinberg DH. Complete Genome Sequence of Streptococcus thermophilus Strain B59671, Which Naturally Produces the Broad-Spectrum Bacteriocin Thermophilin 110. Genome Announc. 2017 Nov 09; 5(45). PMID: 29122869.
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    9. Richards GP, Needleman DS, Watson MA. Complete Genome Sequence of Pseudoalteromonas piscicida Strain DE2-B, a Bacterium with Broad Inhibitory Activity toward Human and Fish Pathogens. Genome Announc. 2017 Aug 17; 5(33). PMID: 28818891.
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    10. Richards GP, Watson MA, Needleman DS, Uknalis J, Boyd EF, Fay JP. Mechanisms for Pseudoalteromonas piscicida-Induced Killing of Vibrios and Other Bacterial Pathogens. Appl Environ Microbiol. 2017 Jun 01; 83(11). PMID: 28363962.
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    11. Fratamico PM, DebRoy C, Needleman DS. Editorial: Emerging Approaches for Typing, Detection, Characterization, and Traceback of Escherichia coli. Front Microbiol. 2016; 7:2089. PMID: 28082959.
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    12. Fratamico PM, DebRoy C, Liu Y, Needleman DS, Baranzoni GM, Feng P. Advances in Molecular Serotyping and Subtyping of Escherichia coli. Front Microbiol. 2016; 7:644. PMID: 27199968.
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    13. DebRoy C, Fratamico PM, Yan X, Baranzoni G, Liu Y, Needleman DS, Tebbs R, O'Connell CD, Allred A, Swimley M, Mwangi M, Kapur V, Garay JA, Roberts EL, Katani R. Correction: Comparison of O-Antigen Gene Clusters of All O-Serogroups of Escherichia coli and Proposal for Adopting a New Nomenclature for O-Typing. PLoS One. 2016; 11(4):e0154551. PMID: 27120356.
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    14. DebRoy C, Fratamico PM, Yan X, Baranzoni G, Liu Y, Needleman DS, Tebbs R, O'Connell CD, Allred A, Swimley M, Mwangi M, Kapur V, Raygoza Garay JA, Roberts EL, Katani R. Comparison of O-Antigen Gene Clusters of All O-Serogroups of Escherichia coli and Proposal for Adopting a New Nomenclature for O-Typing. PLoS One. 2016; 11(1):e0147434. PMID: 26824864.
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    15. Gunther NW, Bono JL, Needleman DS. Complete Genome Sequence of Campylobacter jejuni RM1285, a Rod-Shaped Morphological Variant. Genome Announc. 2015; 3(6). PMID: 26607886.
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    16. Liu Y, Yan X, DebRoy C, Fratamico PM, Needleman DS, Li RW, Wang W, Losada L, Brinkac L, Radune D, Toro M, Hegde N, Meng J. Escherichia coli O-Antigen Gene Clusters of Serogroups O62, O68, O131, O140, O142, and O163: DNA Sequences and Similarity between O62 and O68, and PCR-Based Serogrouping. Biosensors (Basel). 2015; 5(1):51-68. PMID: 25664526.
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    17. Richards GP, Bono JL, Watson MA, Needleman DS. Complete Genome Sequence for the Shellfish Pathogen Vibrio coralliilyticus RE98 Isolated from a Shellfish Hatchery. Genome Announc. 2014; 2(6). PMID: 25523764.
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    18. Richards GP, Needleman DS, Watson MA, Bono JL. Complete Genome Sequence of the Larval Shellfish Pathogen Vibrio tubiashii Type Strain ATCC 19109. Genome Announc. 2014; 2(6). PMID: 25523763.
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    19. Richards GP, Watson MA, Needleman DS, Church KM, Häse CC. Mortalities of Eastern and Pacific oyster Larvae caused by the pathogens Vibrio coralliilyticus and Vibrio tubiashii. Appl Environ Microbiol. 2015 Jan; 81(1):292-7. PMID: 25344234.
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    20. Yan X, Fratamico PM, Needleman DS, Bayles DO. DNA sequence and analysis of a 90.1-kb plasmid in Shiga toxin-producing Escherichia coli (STEC) O145:NM 83-75. Plasmid. 2012 Jul; 68(1):25-32. PMID: 22370037.
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    21. Fratamico PM, Yan X, Caprioli A, Esposito G, Needleman DS, Pepe T, Tozzoli R, Cortesi ML, Morabito S. The complete DNA sequence and analysis of the virulence plasmid and of five additional plasmids carried by Shiga toxin-producing Escherichia coli O26:H11 strain H30. Int J Med Microbiol. 2011 Mar; 301(3):192-203. PMID: 21212019.
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    22. Yan X, Peng Y, Meng J, Ruzante J, Fratamico PM, Huang L, Juneja V, Needleman DS. From ontology selection and semantic web to an integrated information system for food-borne diseases and food safety. Adv Exp Med Biol. 2011; 696:741-50. PMID: 21431616.
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    23. Callicott KA, Hargardóttir H, Georgsson F, Reiersen J, Frigriksdóttir V, Gunnarsson E, Michel P, Bisaillon JR, Kristinsson KG, Briem H, Hiett KL, Needleman DS, Stern NJ. Broiler Campylobacter contamination and human campylobacteriosis in Iceland. Appl Environ Microbiol. 2008 Nov; 74(21):6483-94. PMID: 18791017.
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    24. Needleman D, Adam D, Detwiler M, Escobar H, Kieleczawa J, Pershard R, Schweitzer P, Wiebe G. DNA sequencing research group: 2006 general survey of DNA sequencing facilities. J Biomol Tech. 2007 Apr; 18(2):113-9. PMID: 17496223.
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    25. Callicott KA, Friethriksdóttir V, Reiersen J, Lowman R, Bisaillon JR, Gunnarsson E, Berndtson E, Hiett KL, Needleman DS, Stern NJ. Lack of evidence for vertical transmission of Campylobacter spp. in chickens. Appl Environ Microbiol. 2006 Sep; 72(9):5794-8. PMID: 16957196.
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