Thomas Jefferson University

Mahdi Alizadeh

TitleFaculty Physician
InstitutionThomas Jefferson University
DepartmentNeurosurgery - Thomas Jefferson University
Address909 Walnut Street
Philadelphia PA 19107
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Wu C, Alizadeh M, Kramer MK, Kroen MB, Ziechmann R, Mohamed FB, Wu Q, Johnson CL. Deep Brain Stimulation Electrode Deviations are Associated With Brain Stiffness Interfaces Measured by Magnetic Resonance Elastography. Oper Neurosurg. 2025 Oct 01; 29(4):517-525. PMID: 39976434.
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    2. Diamandi J, Raimondo C, Piper K, Roy J, Serva S, Alizadeh M, Flanders A, Tjoumakaris S, Gooch R, Jabbour P, Rosenwasser R, Mouchtouris N. Use of multi-modal non-contrast MRI to predict functional outcomes after stroke: A study using DP-pCASL, DTI, NODDI, and MAP MRI. Neuroimage Clin. 2025; 45:103742. PMID: 39864167.
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    3. Naghizadeh Kashani S, Vel I, Sadeghi Adl Z, Shahrampour S, Middleton D, Alizadeh M, Krisa L, Faro S, Tounekti S, Cohen-Adad J, Mohamed FB. Magnetization Transfer Ratio in the Typically Developing Pediatric Spinal Cord: Normative Data and Age Correlation. J Neuroimaging. 2025 Jan-Feb; 35(1):e70019. PMID: 39923194.
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    4. Diamandi J, Raimondo C, Alizadeh M, Flanders A, Tjoumakaris S, Gooch MR, Jabbour P, Rosenwasser R, Mouchtouris N. Use of mean apparent propagator (MAP) MRI in patients with acute ischemic stroke: A comparative study with DTI and NODDI. Magn Reson Imaging. 2025 04; 117:110290. PMID: 39631484.
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    5. Monti DA, Faezeh V, Zabrecky G, Alizadeh M, Wintering N, Bazzan AJ, Mohamed FB, Newberg AB. Changes in Resting-State Functional Connectivity and Cognitive-Affective Symptoms in Patients With Post-Concussion Syndrome Treated With N-Acetyl Cysteine. J Head Trauma Rehabil. 2025 May-Jun 01; 40(3):E196-E207. PMID: 39531327.
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    6. Shamli Oghli Y, Ashok A, Glener S, Ailes I, Syed M, Kang KC, Naghizadehkashani S, Fayed I, Mohamed FB, Talekar K, Krisa L, Wu C, Matias C, Alizadeh M. Multimodal functional imaging and clinical correlates of pain regions in chronic low-back pain patients treated with spinal cord stimulation: a pilot study. Front Neuroimaging. 2024; 3:1474060. PMID: 39399386.
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    7. Shoraka O, Syed M, Mandloi S, Thalheimer S, Kashani SN, Heller JE, Mohamed FB, Sharan AD, Talekar KS, Matias CM, Harrop JS, Krisa L, Alizadeh M. Periaqueductal gray connectivity in spinal cord injury-induced neuropathic pain. J Neuroimaging. 2024 Nov-Dec; 34(6):704-719. PMID: 39252511.
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    8. Mouchtouris N, Ailes I, Chang K, Flanders A, Mohamed F, Tjoumakaris S, Gooch R, Jabbour P, Rosenwasser R, Alizadeh M. The impact of mechanical thrombectomy on the blood-brain barrier in patients with acute ischemic stroke: A non-contrast MR imaging study using DP-pCASL and NODDI. Neuroimage Clin. 2024; 43:103629. PMID: 38865844.
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    9. Mouchtouris N, Ailes I, Gooch R, Raimondo C, Oghli YS, Tjoumakaris S, Jabbour P, Rosenwasser R, Alizadeh M. Quantifying blood-brain barrier permeability in patients with ischemic stroke using non-contrast MRI. Magn Reson Imaging. 2024 06; 109:165-172. PMID: 38513785.
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    10. Sathe AV, Alizadeh M, Johannan E, Raimondo C, Sperling M, Sharan A, Kogan M. Stereotactic Electroencephalogram Recordings in Temporal Lobectomy Patients Demonstrates the Predictive Value of Interictal Cross-Frequency Correlations: A Retrospective Study. Brain Sci. 2024 Feb 26; 14(3). PMID: 38539601.
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    11. Vedaei F, Mashhadi N, Alizadeh M, Zabrecky G, Monti D, Wintering N, Navarreto E, Hriso C, Newberg AB, Mohamed FB. Deep learning-based multimodality classification of chronic mild traumatic brain injury using resting-state functional MRI and PET imaging. Front Neurosci. 2023; 17:1333725. PMID: 38312737.
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    12. Vedaei F, Newberg AB, Alizadeh M, Zabrecky G, Navarreto E, Hriso C, Wintering N, Mohamed FB, Monti D. Treatment effects of N-acetyl cysteine on resting-state functional MRI and cognitive performance in patients with chronic mild traumatic brain injury: a longitudinal study. Front Neurol. 2024; 15:1282198. PMID: 38299014.
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    13. Mandloi S, Syed M, Ailes I, Shoraka O, Leiby B, Miao J, Thalheimer S, Heller J, Mohamed FB, Sharan A, Harrop J, Krisa L, Alizadeh M. Exploring Functional Connectivity in Chronic Spinal Cord Injury Patients With Neuropathic Pain Versus Without Neuropathic Pain. Neurotrauma Rep. 2024; 5(1):16-27. PMID: 38249324.
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    14. Kang K, Fleming K, Sathe A, Muller J, Harrop J, Middleton D, Heller JE, Sharan A, Mohamed F, Krisa L, Alizadeh M. Microstructural alterations of major thalamic nuclei in the chronic pediatric spinal cord injured population. World Neurosurg X. 2024 Jan; 21:100268. PMID: 38187507.
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    15. Miao J, Tantawi M, Alizadeh M, Thalheimer S, Vedaei F, Romo V, Mohamed FB, Wu C. Characteristic dynamic functional connectivity during sevoflurane-induced general anesthesia. Sci Rep. 2023 11 29; 13(1):21014. PMID: 38030651.
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    16. Syed M, Miao J, Sathe A, Kang K, Manmatharayan A, Kogan M, Matias CM, Sharan A, Alizadeh M. Profiles of resting state functional connectivity in temporal lobe epilepsy associated with post-laser interstitial thermal therapy seizure outcomes and semiologies. Front Neuroimaging. 2023; 2:1201682. PMID: 38025313.
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    17. Tounekti S, Alizadeh M, Middleton D, Harrop JS, Hiba B, Krisa L, Mekkaoui C, Mohamed FB. Metal artifact reduction around cervical spine implant using diffusion tensor imaging at 3T: A phantom study. Magn Reson Imaging. 2024 01; 105:57-66. PMID: 37939969.
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    18. Muller JJ, Wang R, Milddleton D, Alizadeh M, Kang KC, Hryczyk R, Zabrecky G, Hriso C, Navarreto E, Wintering N, Bazzan AJ, Wu C, Monti DA, Jiao X, Wu Q, Newberg AB, Mohamed FB. Machine learning-based classification of chronic traumatic brain injury using hybrid diffusion imaging. Front Neurosci. 2023; 17:1182509. PMID: 37694125.
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    19. Fayed I, Syed M, Gingold E, Alizadeh M, Sharan A, Wu C. A Novel and Simple Method Using Computed Tomography Streak Artifact to Determine the Orientation of Directional Deep Brain Stimulation Leads. Neurosurgery. 2023 11 01; 93(5):1036-1045. PMID: 37227135.
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    20. Ailes I, Syed M, Matias CM, Krisa L, Miao J, Sathe A, Fayed I, Alhussein A, Natale P, Mohamed FB, Talekar K, Alizadeh M. Case report: Utilizing diffusion-weighted MRI on a patient with chronic low back pain treated with spinal cord stimulation. Front Neuroimaging. 2023; 2:1137848. PMID: 37554655.
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    21. Mandloi S, Syed M, Shoraka O, Ailes I, Kang KC, Sathe A, Heller J, Thalheimer S, Mohamed FB, Sharan A, Harrop J, Krisa L, Matias C, Alizadeh M. The role of the insula in chronic pain following spinal cord injury: A resting-state fMRI study. J Neuroimaging. 2023 Sep-Oct; 33(5):781-791. PMID: 37188633.
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    22. Manmatharayan A, Kogan M, Matias C, Syed M, Shelley I, Chinni A, Kang K, Talekar K, Faro SH, Mohamed FB, Sharan A, Wu C, Alizadeh M. Automated subfield volumetric analysis of amygdala, hippocampus, and thalamic nuclei in mesial temporal lobe epilepsy. World Neurosurg X. 2023 Jul; 19:100212. PMID: 37304157.
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    23. Sathe AV, Matias CM, Kogan M, Ailes I, Syed M, Kang K, Miao J, Talekar K, Faro S, Mohamed FB, Tracy J, Sharan A, Alizadeh M. Resting-State fMRI Can Detect Alterations in Seizure Onset and Spread Regions in Patients with Non-Lesional Epilepsy: A Pilot Study. Front Neuroimaging. 2023; 2. PMID: 37206659.
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    24. Vedaei F, Fayed I, Alizadeh M, Miller C, Zhang AB, Koa V, Khan S, Mohamed FB, Wu C. Effect of Enlarged Perivascular Spaces in Reliable Distinction of Prospective Targeting During Deep Brain Stimulation in Patients With Advanced Parkinson's Disease: A Study of Deterministic and Probabilistic Tractography. Neurosurgery. 2023 09 01; 93(3):691-698. PMID: 37010304.
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    25. Tounekti S, Alizadeh M, Middleton D, Harrop JS, Bassem H, Krisa L, Mekkaoui C, Mohamed FB. Metal Artifact Reduction Around Cervical Spine Implant Using Diffusion Tensor Imaging at 3T: A Phantom Study. Res Sq. 2023 Mar 16. PMID: 36993535.
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    26. Miller CPK, Muller J, Noecker AM, Matias C, Alizadeh M, McIntyre C, Wu C. Automatic Segmentation of Parkinson Disease Therapeutic Targets Using Nonlinear Registration and Clinical MR Imaging: Comparison of Methodology, Presence of Disease, and Quality Control. Stereotact Funct Neurosurg. 2023; 101(2):146-157. PMID: 36882011.
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    27. Kang K, Sathe A, Mandloi S, Muller J, Ozuna GAG, Franco D, Miller C, Sharan A, Mohamed FB, Faro S, Alizadeh M, Wu C. Evaluation of eight registration algorithms applied to the insula and insular gyri. J Neuroimaging. 2023 May-Jun; 33(3):446-454. PMID: 36813464.
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    28. Sathe AV, Kogan M, Kang K, Miao J, Syed M, Ailes I, Matias CM, Middleton D, Mohamed FB, Faro S, Tracy J, Sharan A, Alizadeh M. Amplitude synchronization of spontaneous activity of medial and lateral temporal gyri reveals altered thalamic connectivity in patients with temporal lobe epilepsy. Sci Rep. 2022 11 01; 12(1):18389. PMID: 36319701.
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    29. Miao J, Ailes I, Krisa L, Fleming K, Middleton D, Talekar K, Natale P, Mohamed FB, Hines K, Matias CM, Alizadeh M. Case report: The promising application of dynamic functional connectivity analysis on an individual with failed back surgery syndrome. Front Neurosci. 2022; 16:987223. PMID: 36213747.
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    30. Vedaei F, Alizadeh M, Tantawi M, Romo V, Mohamed FB, Wu C. Vascular and neuronal effects of general anesthesia on the brain: An fMRI study. J Neuroimaging. 2023 01; 33(1):109-120. PMID: 36097249.
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    31. Vedaei F, Alizadeh M, Romo V, Mohamed FB, Wu C. The effect of general anesthesia on the test-retest reliability of resting-state fMRI metrics and optimization of scan length. Front Neurosci. 2022; 16:937172. PMID: 36051647.
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    32. Faro SH, Saksena S, Krisa L, Middleton DM, Alizadeh M, Finsterbusch J, Flanders AE, Talekar K, Mulcahey MJ, Mohamed FB. DTI of chronic spinal cord injury in children without MRI abnormalities (SCIWOMR) and with pathology on MRI and comparison to severity of motor impairment. Spinal Cord. 2022 05; 60(5):457-464. PMID: 35379960.
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    33. Moss AS, Reibel DK, Wintering N, Vedaei F, Porter H, Khosravi M, Heholt J, Alizadeh M, Mohamed FB, Newberg AB. Cerebral Blood Flow and Brain Functional Connectivity Changes in Older Adults Participating in a Mindfulness-Based Stress Reduction Program. Behav Sci (Basel). 2022 Feb 14; 12(2). PMID: 35200299.
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    34. Vedaei F, Newberg AB, Alizadeh M, Muller J, Shahrampour S, Middleton D, Zabrecky G, Wintering N, Bazzan AJ, Monti DA, Mohamed FB. Resting-State Functional MRI Metrics in Patients With Chronic Mild Traumatic Brain Injury and Their Association With Clinical Cognitive Performance. Front Hum Neurosci. 2021; 15:768485. PMID: 35027887.
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    35. Middleton DM, Shahrampour S, Krisa L, Liu W, Nair G, Jacobson S, Conklin CJ, Alizadeh M, Faro SH, Mulcahey MJ, Mohamed FB. Correlations of diffusion tensor imaging and clinical measures with spinal cord cross-sectional area measurements in pediatric spinal cord injury patients. J Spinal Cord Med. 2023 11; 46(6):950-957. PMID: 34855576.
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    36. Muller J, Alizadeh M, Matias CM, Thalheimer S, Romo V, Martello J, Liang TW, Mohamed FB, Wu C. Use of probabilistic tractography to provide reliable distinction of the motor and sensory thalamus for prospective targeting during asleep deep brain stimulation. J Neurosurg. 2022 May 01; 136(5):1371-1380. PMID: 34624856.
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    37. Shahrampour S, De Leener B, Alizadeh M, Middleton D, Krisa L, Flanders AE, Faro SH, Cohen-Adad J, Mohamed FB. Atlas-Based Quantification of DTI Measures in a Typically Developing Pediatric Spinal Cord. AJNR Am J Neuroradiol. 2021 09; 42(9):1727-1734. PMID: 34326104.
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    38. Alizadeh M, Manmatharayan AR, Johnston T, Thalheimer S, Finley M, Detloff M, Sharan A, Harrop J, Newburg A, Krisa L, Mohamed FB. Graph theoretical structural connectome analysis of the brain in patients with chronic spinal cord injury: preliminary investigation. Spinal Cord Ser Cases. 2021 07 17; 7(1):60. PMID: 34274953.
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    39. Shahrampour S, Heholt J, Wang A, Vedaei F, Mohamed FB, Alizadeh M, Wang Z, Zabrecky G, Wintering N, Bazzan AJ, Leist TP, Monti DA, Newberg AB. N-acetyl cysteine administration affects cerebral blood flow as measured by arterial spin labeling MRI in patients with multiple sclerosis. Heliyon. 2021 Jul; 7(7):e07615. PMID: 34377857.
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    40. Fisher J, Alizadeh M, Middleton D, Matias CM, Mulcahey MJ, Calhoun-Thielen C, Mohamed FB, Krisa L. Brain White Matter Abnormality Induced by Chronic Spinal Cord Injury in the Pediatric Population: A Preliminary Tract-based Spatial Statistic Study. Top Spinal Cord Inj Rehabil. 2021; 27(4):1-13. PMID: 34866884.
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    41. Muller J, Middleton D, Alizadeh M, Zabrecky G, Wintering N, Bazzan AJ, Lang J, Wu C, Monti DA, Wu Q, Newberg AB, Mohamed FB. Hybrid diffusion imaging reveals altered white matter tract integrity and associations with symptoms and cognitive dysfunction in chronic traumatic brain injury. Neuroimage Clin. 2021; 30:102681. PMID: 34215151.
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    42. Zabrecky G, Shahrampour S, Whitely C, Alizadeh M, Conklin C, Wintering N, Doghramji K, Zhan T, Mohamed F, Newberg A, Monti D. An fMRI Study of the Effects of Vibroacoustic Stimulation on Functional Connectivity in Patients with Insomnia. Sleep Disord. 2020; 2020:7846914. PMID: 32089894.
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    43. Muller J, Alizadeh M, Li L, Thalheimer S, Matias C, Tantawi M, Miao J, Silverman M, Zhang V, Yun G, Romo V, Mohamed FB, Wu C. Feasibility of diffusion and probabilistic white matter analysis in patients implanted with a deep brain stimulator. Neuroimage Clin. 2020; 25:102135. PMID: 31901789.
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    44. Poplawski MM, Alizadeh M, Oleson CV, Fisher J, Marino RJ, Gorniak RJ, Leiby BE, Flanders AE. Application of Diffusion Tensor Imaging in Forecasting Neurological Injury and Recovery after Human Cervical Spinal Cord Injury. J Neurotrauma. 2019 11 01; 36(21):3051-3061. PMID: 31057044.
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    45. Galovic M, Baudracco I, Wright-Goff E, Pillajo G, Nachev P, Wandschneider B, Woermann F, Thompson P, Baxendale S, McEvoy AW, Nowell M, Mancini M, Vos SB, Winston GP, Sparks R, Prados F, Miserocchi A, de Tisi J, Van Graan LA, Rodionov R, Wu C, Alizadeh M, Kozlowski L, Sharan AD, Kini LG, Davis KA, Litt B, Ourselin S, Mosh? SL, Sander JWA, L?scher W, Duncan JS, Koepp MJ. Association of Piriform Cortex Resection With Surgical Outcomes in Patients With Temporal Lobe Epilepsy. JAMA Neurol. 2019 06 01; 76(6):690-700. PMID: 30855662.
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    46. Alizadeh M, Kozlowski L, Muller J, Ashraf N, Shahrampour S, Mohamed FB, Wu C, Sharan A. Hemispheric Regional Based Analysis of Diffusion Tensor Imaging and Diffusion Tensor Tractography in Patients with Temporal Lobe Epilepsy and Correlation with Patient outcomes. Sci Rep. 2019 01 18; 9(1):215. PMID: 30659215.
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    47. Muller J, Alizadeh M, Mohamed FB, Riley J, Pearce JJ, Trieu B, Liang TW, Romo V, Sharan A, Wu C. Clinically applicable delineation of the pallidal sensorimotor region in patients with advanced Parkinson's disease: study of probabilistic and deterministic tractography. J Neurosurg. 2019 11 01; 131(5):1520-1531. PMID: 30554176.
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    48. Saksena S, Mohamed FB, Middleton DM, Krisa L, Alizadeh M, Shahrampour S, Conklin CJ, Flanders A, Finsterbusch J, Mulcahey MJ, Faro SH. Diffusion Tensor Imaging Assessment of Regional White Matter Changes in the Cervical and Thoracic Spinal Cord in Pediatric Subjects. J Neurotrauma. 2019 03 19; 36(6):853-861. PMID: 30113265.
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    49. Alizadeh M, Shah P, Conklin CJ, Middleton DM, Saksena S, Flanders AE, Krisa L, Mulcahey MJ, Faro SH, Mohamed FB. Application of Color Transformation Techniques in Pediatric Spinal Cord MR Images: Typically Developing and Spinal Cord Injury Population. J Digit Imaging. 2018 08; 31(4):543-552. PMID: 29340936.
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    50. Saksena S, Alizadeh M, Middleton DM, Conklin CJ, Krisa L, Flanders A, Mulcahey MJ, Mohamed FB, Faro SH. Characterization of spinal cord diffusion tensor imaging metrics in clinically asymptomatic pediatric subjects with incidental congenital lesions. Spinal Cord Ser Cases. 2018; 4:41. PMID: 29928513.
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    51. Alizadeh M, Fisher J, Saksena S, Sultan Y, Conklin CJ, Middleton DM, Krisa L, Finsterbusch J, Flanders AE, Faro SH, Mulcahey MJ, Mohamed FB. Age related diffusion and tractography changes in typically developing pediatric cervical and thoracic spinal cord. Neuroimage Clin. 2018; 18:784-792. PMID: 29876264.
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    52. Alizadeh M, Fisher J, Saksena S, Sultan Y, Conklin CJ, Middleton DM, Finsterbusch J, Krisa L, Flanders AE, Faro SH, Mulcahey MJ, Mohamed FB. Reduced Field of View Diffusion Tensor Imaging and Fiber Tractography of the Pediatric Cervical and Thoracic Spinal Cord Injury. J Neurotrauma. 2018 02 01; 35(3):452-460. PMID: 29073810.
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    53. Alizadeh M, Conklin CJ, Middleton DM, Shah P, Saksena S, Krisa L, Finsterbusch J, Faro SH, Mulcahey MJ, Mohamed FB. Identification of ghost artifact using texture analysis in pediatric spinal cord diffusion tensor images. Magn Reson Imaging. 2018 04; 47:7-15. PMID: 29154897.
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    54. Conklin CJ, Middleton DM, Alizadeh M, Finsterbusch J, Raunig DL, Faro SH, Shah P, Krisa L, Sinko R, Delalic JZ, Mulcahey MJ, Mohamed FB. Spatially selective 2D RF inner field of view (iFOV) diffusion kurtosis imaging (DKI) of the pediatric spinal cord. Neuroimage Clin. 2016; 11:61-67. PMID: 26909329.
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