Below are the most recent publications written about "DNA Transposable Elements" by people in Profiles.
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Catlin NS, Agha HI, Platts AE, Munasinghe M, Hirsch CN, Josephs EB. Structural Variants Contribute to Phenotypic Variation in Maize. Mol Ecol. 2025 12; 34(24):e17662.
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Ou S, Scheben A, Collins T, Qiu Y, Seetharam AS, Menard CC, Manchanda N, Gent JI, Schatz MC, Anderson SN, Hufford MB, Hirsch CN. Differences in activity and stability drive transposable element variation in tropical and temperate maize. Genome Res. 2024 09 20; 34(8):1140-1153.
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Ou S, Jiang N, Hirsch CN, Hufford MB. Response to Commentary: Accounting for diverse transposable element landscapes is key to developing and evaluating accurate de novo annotation strategies. Genome Biol. 2024 01 02; 25(1):6.
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Munasinghe M, Read A, Stitzer MC, Song B, Menard CC, Ma KY, Brandvain Y, Hirsch CN, Springer N. Combined analysis of transposable elements and structural variation in maize genomes reveals genome contraction outpaces expansion. PLoS Genet. 2023 12; 19(12):e1011086.
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Scopa C, Barnada SM, Cicardi ME, Singer M, Trotti D, Trizzino M. JUN upregulation drives aberrant transposable element mobilization, associated innate immune response, and impaired neurogenesis in Alzheimer's disease. Nat Commun. 2023 12 04; 14(1):8021.
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Ellison EL, Zhou P, Hermanson P, Chu YH, Read A, Hirsch CN, Grotewold E, Springer NM. Mutator transposon insertions within maize genes often provide a novel outward reading promoter. Genetics. 2023 11 01; 225(3).
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Patoori S, Barnada SM, Large C, Murray JI, Trizzino M. Young transposable elements rewired gene regulatory networks in human and chimpanzee hippocampal intermediate progenitors. Development. 2022 10 01; 149(19).
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Barnada SM, Isopi A, Tejada-Martinez D, Goubert C, Patoori S, Pagliaroli L, Tracewell M, Trizzino M. Genomic features underlie the co-option of SVA transposons as cis-regulatory elements in human pluripotent stem cells. PLoS Genet. 2022 06; 18(6):e1010225.
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Qiu Y, O'Connor CH, Della Coletta R, Renk JS, Monnahan PJ, Noshay JM, Liang Z, Gilbert A, Anderson SN, McGaugh SE, Springer NM, Hirsch CN. Whole-genome variation of transposable element insertions in a maize diversity panel. G3 (Bethesda). 2021 09 27; 11(10).
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Ross K, Varani AM, Snesrud E, Huang H, Alvarenga DO, Zhang J, Wu C, McGann P, Chandler M. TnCentral: a Prokaryotic Transposable Element Database and Web Portal for Transposon Analysis. mBio. 2021 10 26; 12(5):e0206021.